我能从决策树中的训练树中提取基本的决策规则(或“决策路径”)作为文本列表吗?
喜欢的东西:
if A>0.4 then if B<0.2 then if C>0.8 then class='X'
我能从决策树中的训练树中提取基本的决策规则(或“决策路径”)作为文本列表吗?
喜欢的东西:
if A>0.4 then if B<0.2 then if C>0.8 then class='X'
当前回答
这是基于@paulkernfeld的回答。如果你有一个包含特征的数据框架X和一个包含共振的目标数据框架y,你想知道哪个y值结束于哪个节点(并相应地绘制它),你可以做以下工作:
def tree_to_code(tree, feature_names):
from sklearn.tree import _tree
codelines = []
codelines.append('def get_cat(X_tmp):\n')
codelines.append(' catout = []\n')
codelines.append(' for codelines in range(0,X_tmp.shape[0]):\n')
codelines.append(' Xin = X_tmp.iloc[codelines]\n')
tree_ = tree.tree_
feature_name = [
feature_names[i] if i != _tree.TREE_UNDEFINED else "undefined!"
for i in tree_.feature
]
#print "def tree({}):".format(", ".join(feature_names))
def recurse(node, depth):
indent = " " * depth
if tree_.feature[node] != _tree.TREE_UNDEFINED:
name = feature_name[node]
threshold = tree_.threshold[node]
codelines.append ('{}if Xin["{}"] <= {}:\n'.format(indent, name, threshold))
recurse(tree_.children_left[node], depth + 1)
codelines.append( '{}else: # if Xin["{}"] > {}\n'.format(indent, name, threshold))
recurse(tree_.children_right[node], depth + 1)
else:
codelines.append( '{}mycat = {}\n'.format(indent, node))
recurse(0, 1)
codelines.append(' catout.append(mycat)\n')
codelines.append(' return pd.DataFrame(catout,index=X_tmp.index,columns=["category"])\n')
codelines.append('node_ids = get_cat(X)\n')
return codelines
mycode = tree_to_code(clf,X.columns.values)
# now execute the function and obtain the dataframe with all nodes
exec(''.join(mycode))
node_ids = [int(x[0]) for x in node_ids.values]
node_ids2 = pd.DataFrame(node_ids)
print('make plot')
import matplotlib.cm as cm
colors = cm.rainbow(np.linspace(0, 1, 1+max( list(set(node_ids)))))
#plt.figure(figsize=cm2inch(24, 21))
for i in list(set(node_ids)):
plt.plot(y[node_ids2.values==i],'o',color=colors[i], label=str(i))
mytitle = ['y colored by node']
plt.title(mytitle ,fontsize=14)
plt.xlabel('my xlabel')
plt.ylabel(tagname)
plt.xticks(rotation=70)
plt.legend(loc='upper center', bbox_to_anchor=(0.5, 1.00), shadow=True, ncol=9)
plt.tight_layout()
plt.show()
plt.close
不是最优雅的版本,但它做到了…
其他回答
from StringIO import StringIO
out = StringIO()
out = tree.export_graphviz(clf, out_file=out)
print out.getvalue()
你可以看到一个有向图树。然后,clf.tree_。Feature和clf.tree_。值分别为节点数组拆分特征和节点数组值。你可以参考这个github来源的更多细节。
我需要一种更人性化的决策树规则格式。我正在构建开源AutoML Python包,很多时候MLJAR用户希望从树中看到确切的规则。
这就是为什么我实现了一个基于paulkernfeld答案的函数。
def get_rules(tree, feature_names, class_names):
tree_ = tree.tree_
feature_name = [
feature_names[i] if i != _tree.TREE_UNDEFINED else "undefined!"
for i in tree_.feature
]
paths = []
path = []
def recurse(node, path, paths):
if tree_.feature[node] != _tree.TREE_UNDEFINED:
name = feature_name[node]
threshold = tree_.threshold[node]
p1, p2 = list(path), list(path)
p1 += [f"({name} <= {np.round(threshold, 3)})"]
recurse(tree_.children_left[node], p1, paths)
p2 += [f"({name} > {np.round(threshold, 3)})"]
recurse(tree_.children_right[node], p2, paths)
else:
path += [(tree_.value[node], tree_.n_node_samples[node])]
paths += [path]
recurse(0, path, paths)
# sort by samples count
samples_count = [p[-1][1] for p in paths]
ii = list(np.argsort(samples_count))
paths = [paths[i] for i in reversed(ii)]
rules = []
for path in paths:
rule = "if "
for p in path[:-1]:
if rule != "if ":
rule += " and "
rule += str(p)
rule += " then "
if class_names is None:
rule += "response: "+str(np.round(path[-1][0][0][0],3))
else:
classes = path[-1][0][0]
l = np.argmax(classes)
rule += f"class: {class_names[l]} (proba: {np.round(100.0*classes[l]/np.sum(classes),2)}%)"
rule += f" | based on {path[-1][1]:,} samples"
rules += [rule]
return rules
规则按照分配给每个规则的训练样本的数量进行排序。对于每条规则,都有关于预测的类名和分类任务预测概率的信息。对于回归任务,只打印关于预测值的信息。
例子
from sklearn import datasets
from sklearn.tree import DecisionTreeRegressor
from sklearn import tree
# Prepare the data data
boston = datasets.load_boston()
X = boston.data
y = boston.target
# Fit the regressor, set max_depth = 3
regr = DecisionTreeRegressor(max_depth=3, random_state=1234)
model = regr.fit(X, y)
# Print rules
rules = get_rules(regr, boston.feature_names, None)
for r in rules:
print(r)
印刷规则:
if (RM <= 6.941) and (LSTAT <= 14.4) and (DIS > 1.385) then response: 22.905 | based on 250 samples
if (RM <= 6.941) and (LSTAT > 14.4) and (CRIM <= 6.992) then response: 17.138 | based on 101 samples
if (RM <= 6.941) and (LSTAT > 14.4) and (CRIM > 6.992) then response: 11.978 | based on 74 samples
if (RM > 6.941) and (RM <= 7.437) and (NOX <= 0.659) then response: 33.349 | based on 43 samples
if (RM > 6.941) and (RM > 7.437) and (PTRATIO <= 19.65) then response: 45.897 | based on 29 samples
if (RM <= 6.941) and (LSTAT <= 14.4) and (DIS <= 1.385) then response: 45.58 | based on 5 samples
if (RM > 6.941) and (RM <= 7.437) and (NOX > 0.659) then response: 14.4 | based on 3 samples
if (RM > 6.941) and (RM > 7.437) and (PTRATIO > 19.65) then response: 21.9 | based on 1 samples
我在我的文章中总结了从决策树中提取规则的方法:用Scikit-Learn和Python以3种方式从决策树中提取规则。
下面是一种使用SKompiler库将整个树转换为单个(不一定太容易读懂)python表达式的方法:
from skompiler import skompile
skompile(dtree.predict).to('python/code')
显然,很久以前就有人决定尝试将以下函数添加到官方scikit的树导出函数中(基本上只支持export_graphviz)
def export_dict(tree, feature_names=None, max_depth=None) :
"""Export a decision tree in dict format.
以下是他的全部承诺:
https://github.com/scikit-learn/scikit-learn/blob/79bdc8f711d0af225ed6be9fdb708cea9f98a910/sklearn/tree/export.py
不太确定这条评论发生了什么。但是你也可以尝试使用这个函数。
我认为这为scikit-learn的优秀人员提供了一个严肃的文档需求,以正确地记录sklearn.tree.Tree API,这是一个底层的树结构,DecisionTreeClassifier将其作为属性tree_公开。
这是基于@paulkernfeld的回答。如果你有一个包含特征的数据框架X和一个包含共振的目标数据框架y,你想知道哪个y值结束于哪个节点(并相应地绘制它),你可以做以下工作:
def tree_to_code(tree, feature_names):
from sklearn.tree import _tree
codelines = []
codelines.append('def get_cat(X_tmp):\n')
codelines.append(' catout = []\n')
codelines.append(' for codelines in range(0,X_tmp.shape[0]):\n')
codelines.append(' Xin = X_tmp.iloc[codelines]\n')
tree_ = tree.tree_
feature_name = [
feature_names[i] if i != _tree.TREE_UNDEFINED else "undefined!"
for i in tree_.feature
]
#print "def tree({}):".format(", ".join(feature_names))
def recurse(node, depth):
indent = " " * depth
if tree_.feature[node] != _tree.TREE_UNDEFINED:
name = feature_name[node]
threshold = tree_.threshold[node]
codelines.append ('{}if Xin["{}"] <= {}:\n'.format(indent, name, threshold))
recurse(tree_.children_left[node], depth + 1)
codelines.append( '{}else: # if Xin["{}"] > {}\n'.format(indent, name, threshold))
recurse(tree_.children_right[node], depth + 1)
else:
codelines.append( '{}mycat = {}\n'.format(indent, node))
recurse(0, 1)
codelines.append(' catout.append(mycat)\n')
codelines.append(' return pd.DataFrame(catout,index=X_tmp.index,columns=["category"])\n')
codelines.append('node_ids = get_cat(X)\n')
return codelines
mycode = tree_to_code(clf,X.columns.values)
# now execute the function and obtain the dataframe with all nodes
exec(''.join(mycode))
node_ids = [int(x[0]) for x in node_ids.values]
node_ids2 = pd.DataFrame(node_ids)
print('make plot')
import matplotlib.cm as cm
colors = cm.rainbow(np.linspace(0, 1, 1+max( list(set(node_ids)))))
#plt.figure(figsize=cm2inch(24, 21))
for i in list(set(node_ids)):
plt.plot(y[node_ids2.values==i],'o',color=colors[i], label=str(i))
mytitle = ['y colored by node']
plt.title(mytitle ,fontsize=14)
plt.xlabel('my xlabel')
plt.ylabel(tagname)
plt.xticks(rotation=70)
plt.legend(loc='upper center', bbox_to_anchor=(0.5, 1.00), shadow=True, ncol=9)
plt.tight_layout()
plt.show()
plt.close
不是最优雅的版本,但它做到了…