让我们假设我们有一个数据集,它大概是

import numpy as np
x = np.linspace(0,2*np.pi,100)
y = np.sin(x) + np.random.random(100) * 0.2

Therefore we have a variation of 20% of the dataset. My first idea was to use the UnivariateSpline function of scipy, but the problem is that this does not consider the small noise in a good way. If you consider the frequencies, the background is much smaller than the signal, so a spline only of the cutoff might be an idea, but that would involve a back and forth fourier transformation, which might result in bad behaviour. Another way would be a moving average, but this would also need the right choice of the delay.

有什么提示/书籍或链接可以解决这个问题吗?


当前回答

你也可以用这个:

def smooth(scalars, weight = 0.8):  # Weight between 0 and 1
        return [scalars[i] * weight + (1 - weight) * scalars[i+1] for i in range(len(scalars)) if i < len(scalars)-1]

其他回答

使用移动平均线,一种快速的方法(也适用于非双射函数)是

def smoothen(x, winsize=5):
    return np.array(pd.Series(x).rolling(winsize).mean())[winsize-1:]

此代码基于https://towardsdatascience.com/data-smoothing-for-data-science-visualization-the-goldilocks-trio-part-1-867765050615。文中还讨论了更先进的解决方案。

在scipy中有一个简单的函数。Ndimage也适用于我:

from scipy.ndimage import uniform_filter1d

y_smooth = uniform_filter1d(y,size=15)

编辑:看看这个答案。使用np。Cumsum比np.卷积快得多

我使用了一种快速而肮脏的方法来平滑数据,基于移动平均盒(通过卷积):

x = np.linspace(0,2*np.pi,100)
y = np.sin(x) + np.random.random(100) * 0.8

def smooth(y, box_pts):
    box = np.ones(box_pts)/box_pts
    y_smooth = np.convolve(y, box, mode='same')
    return y_smooth

plot(x, y,'o')
plot(x, smooth(y,3), 'r-', lw=2)
plot(x, smooth(y,19), 'g-', lw=2)

如果您正在绘制时间序列图,并且如果您已经使用mtplotlib来绘制图形,那么请使用 中值方法平滑图

smotDeriv = timeseries.rolling(window=20, min_periods=5, center=True).median()

时间序列是您传递的数据集,您可以更改窗口大小以更平滑。

对于我的一个项目,我需要为时间序列建模创建间隔,为了使过程更高效,我创建了tsmoothie:一个python库,用于以向量化的方式平滑时间序列和异常值检测。

它提供了不同的平滑算法以及计算间隔的可能性。

这里我使用了一个convolutionsmooth,但是你也可以测试其他的。

import numpy as np
import matplotlib.pyplot as plt
from tsmoothie.smoother import *

x = np.linspace(0,2*np.pi,100)
y = np.sin(x) + np.random.random(100) * 0.2

# operate smoothing
smoother = ConvolutionSmoother(window_len=5, window_type='ones')
smoother.smooth(y)

# generate intervals
low, up = smoother.get_intervals('sigma_interval', n_sigma=2)

# plot the smoothed timeseries with intervals
plt.figure(figsize=(11,6))
plt.plot(smoother.smooth_data[0], linewidth=3, color='blue')
plt.plot(smoother.data[0], '.k')
plt.fill_between(range(len(smoother.data[0])), low[0], up[0], alpha=0.3)

我还指出tsmoothie可以用向量化的方式对多个时间序列进行平滑