我正在寻找一个函数,它将两个列表作为输入,并返回Pearson相关性,以及相关性的重要性。
当前回答
一个替代方法可以是一个来自linreturn的本地scipy函数,它计算:
斜率:回归线的斜率 截距:回归线的截距 R-value:相关系数 p值:零假设为斜率为零的假设检验的双面p值 stderr:估计的标准错误
这里有一个例子:
a = [15, 12, 8, 8, 7, 7, 7, 6, 5, 3]
b = [10, 25, 17, 11, 13, 17, 20, 13, 9, 15]
from scipy.stats import linregress
linregress(a, b)
会回复你:
LinregressResult(slope=0.20833333333333337, intercept=13.375, rvalue=0.14499815458068521, pvalue=0.68940144811669501, stderr=0.50261704627083648)
其他回答
Pearson coefficient calculation using pandas in python: I would suggest trying this approach since your data contains lists. It will be easy to interact with your data and manipulate it from the console since you can visualise your data structure and update it as you wish. You can also export the data set and save it and add new data out of the python console for later analysis. This code is simpler and contains less lines of code. I am assuming you need a few quick lines of code to screen your data for further analysis
例子:
data = {'list 1':[2,4,6,8],'list 2':[4,16,36,64]}
import pandas as pd #To Convert your lists to pandas data frames convert your lists into pandas dataframes
df = pd.DataFrame(data, columns = ['list 1','list 2'])
from scipy import stats # For in-built method to get PCC
pearson_coef, p_value = stats.pearsonr(df["list 1"], df["list 2"]) #define the columns to perform calculations on
print("Pearson Correlation Coefficient: ", pearson_coef, "and a P-value of:", p_value) # Results
但是,在分析之前,你没有发布你的数据给我看数据集的大小或可能需要的转换。
对此,我有一个非常简单易懂的解决方案。对于两个长度相等的数组,Pearson系数可以很容易地计算如下:
def manual_pearson(a,b):
"""
Accepts two arrays of equal length, and computes correlation coefficient.
Numerator is the sum of product of (a - a_avg) and (b - b_avg),
while denominator is the product of a_std and b_std multiplied by
length of array.
"""
a_avg, b_avg = np.average(a), np.average(b)
a_stdev, b_stdev = np.std(a), np.std(b)
n = len(a)
denominator = a_stdev * b_stdev * n
numerator = np.sum(np.multiply(a-a_avg, b-b_avg))
p_coef = numerator/denominator
return p_coef
从Python 3.10开始,Pearson的相关系数(statistics.correlation)可以直接在标准库中获得:
from statistics import correlation
# a = [15, 12, 8, 8, 7, 7, 7, 6, 5, 3]
# b = [10, 25, 17, 11, 13, 17, 20, 13, 9, 15]
correlation(a, b)
# 0.1449981545806852
这是使用numpy的Pearson Correlation函数的实现:
def corr(data1, data2):
"data1 & data2 should be numpy arrays."
mean1 = data1.mean()
mean2 = data2.mean()
std1 = data1.std()
std2 = data2.std()
# corr = ((data1-mean1)*(data2-mean2)).mean()/(std1*std2)
corr = ((data1*data2).mean()-mean1*mean2)/(std1*std2)
return corr
Pearson相关性可以用numpy的corrcoef来计算。
import numpy
numpy.corrcoef(list1, list2)[0, 1]
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